A0A544ZVR6 protein (Golovinomyces magnicellulatus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A544ZVR6

TLC domain-containing protein. (331 aa)

Predicted Functional Partners:

A0A544ZZZ8

0.606

A0A544ZZN7

0.589

A0A545A813

0.581

A0A545A5H5

0.579

A0A545A992

0.579

A0A544ZYG8

0.554

A0A545A6M7

0.554

A0A545A8F5

0.521

A0A545A775

0.424

A0A545AAG7

0.424

Your Current Organism:

Golovinomyces magnicellulatus

NCBI taxonomy Id: 62714
Other names: Erysiphe magnacellulata, G. magnicellulatus

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A544ZVR6	A0A544ZYG8	TLC domain-containing protein.	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.554
A0A544ZVR6	A0A544ZZN7	TLC domain-containing protein.	Uncharacterized protein.	0.589
A0A544ZVR6	A0A544ZZZ8	TLC domain-containing protein.	Calpain catalytic domain-containing protein; Belongs to the peptidase C2 family.	0.606
A0A544ZVR6	A0A545A5H5	TLC domain-containing protein.	RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.579
A0A544ZVR6	A0A545A6M7	TLC domain-containing protein.	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.554
A0A544ZVR6	A0A545A775	TLC domain-containing protein.	Serine/threonine-protein phosphatase.	0.424
A0A544ZVR6	A0A545A813	TLC domain-containing protein.	Myotubularin phosphatase domain-containing protein.	0.581
A0A544ZVR6	A0A545A8F5	TLC domain-containing protein.	Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.	0.521
A0A544ZVR6	A0A545A992	TLC domain-containing protein.	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.579
A0A544ZVR6	A0A545AAG7	TLC domain-containing protein.	Serine/threonine-protein phosphatase.	0.424
A0A544ZYG8	A0A544ZVR6	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	TLC domain-containing protein.	0.554
A0A544ZYG8	A0A544ZZN7	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Uncharacterized protein.	0.667
A0A544ZYG8	A0A544ZZZ8	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Calpain catalytic domain-containing protein; Belongs to the peptidase C2 family.	0.662
A0A544ZYG8	A0A545A5H5	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.672
A0A544ZYG8	A0A545A775	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Serine/threonine-protein phosphatase.	0.540
A0A544ZYG8	A0A545A813	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Myotubularin phosphatase domain-containing protein.	0.661
A0A544ZYG8	A0A545A992	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.	0.790
A0A544ZYG8	A0A545AAG7	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Serine/threonine-protein phosphatase.	0.540
A0A544ZZN7	A0A544ZVR6	Uncharacterized protein.	TLC domain-containing protein.	0.589
A0A544ZZN7	A0A544ZYG8	Uncharacterized protein.	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.667