A0A544ZWM5 protein (Golovinomyces magnicellulatus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A544ZWM5

MFS domain-containing protein. (528 aa)

Predicted Functional Partners:

A0A545A3C0

0.607

A0A544ZTM5

0.504

A0A545A3F1

0.504

A0A545A8Y3

0.504

A0A545A913

0.504

A0A544ZU94

0.450

A0A544ZWU3

0.450

A0A544ZYP3

0.450

A0A545AA71

0.450

A0A545AD54

0.450

Your Current Organism:

Golovinomyces magnicellulatus

NCBI taxonomy Id: 62714
Other names: Erysiphe magnacellulata, G. magnicellulatus

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A544ZTM5	A0A544ZU94	Adaptin_N domain-containing protein.	Adaptin_N domain-containing protein.	0.961
A0A544ZTM5	A0A544ZWM5	Adaptin_N domain-containing protein.	MFS domain-containing protein.	0.504
A0A544ZTM5	A0A544ZWU3	Adaptin_N domain-containing protein.	Adaptin_N domain-containing protein.	0.879
A0A544ZTM5	A0A544ZYP3	Adaptin_N domain-containing protein.	Adaptin_N domain-containing protein.	0.879
A0A544ZTM5	A0A545AA71	Adaptin_N domain-containing protein.	AP-1 complex subunit gamma.	0.961
A0A544ZTM5	A0A545AD54	Adaptin_N domain-containing protein.	AP-3 complex subunit delta; Part of the AP-3 complex, an adaptor-related complex which is not clathrin-associated. The complex is associated with the Golgi region as well as more peripheral structures. It facilitates the budding of vesicles from the Golgi membrane.	0.879
A0A544ZU94	A0A544ZTM5	Adaptin_N domain-containing protein.	Adaptin_N domain-containing protein.	0.961
A0A544ZU94	A0A544ZWM5	Adaptin_N domain-containing protein.	MFS domain-containing protein.	0.450
A0A544ZU94	A0A545A3C0	Adaptin_N domain-containing protein.	Uncharacterized protein.	0.702
A0A544ZU94	A0A545A3F1	Adaptin_N domain-containing protein.	AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.	0.961
A0A544ZU94	A0A545A8Y3	Adaptin_N domain-containing protein.	Rad60-SLD_2 domain-containing protein.	0.961
A0A544ZU94	A0A545A913	Adaptin_N domain-containing protein.	AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.	0.961
A0A544ZWM5	A0A544ZTM5	MFS domain-containing protein.	Adaptin_N domain-containing protein.	0.504
A0A544ZWM5	A0A544ZU94	MFS domain-containing protein.	Adaptin_N domain-containing protein.	0.450
A0A544ZWM5	A0A544ZWU3	MFS domain-containing protein.	Adaptin_N domain-containing protein.	0.450
A0A544ZWM5	A0A544ZYP3	MFS domain-containing protein.	Adaptin_N domain-containing protein.	0.450
A0A544ZWM5	A0A545A3C0	MFS domain-containing protein.	Uncharacterized protein.	0.607
A0A544ZWM5	A0A545A3F1	MFS domain-containing protein.	AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.	0.504
A0A544ZWM5	A0A545A8Y3	MFS domain-containing protein.	Rad60-SLD_2 domain-containing protein.	0.504
A0A544ZWM5	A0A545A913	MFS domain-containing protein.	AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.	0.504