Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
A0A544ZSS5 | A0A544ZVR2 | L-lactate dehydrogenase; Belongs to the LDH/MDH superfamily. | Fe-ADH domain-containing protein. | 0.539 |
A0A544ZSS5 | A0A545A284 | L-lactate dehydrogenase; Belongs to the LDH/MDH superfamily. | Uncharacterized protein. | 0.898 |
A0A544ZSS5 | A0A545A2H0 | L-lactate dehydrogenase; Belongs to the LDH/MDH superfamily. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.960 |
A0A544ZSS5 | A0A545A2T3 | L-lactate dehydrogenase; Belongs to the LDH/MDH superfamily. | Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family. | 0.887 |
A0A544ZSS5 | A0A545A4G4 | L-lactate dehydrogenase; Belongs to the LDH/MDH superfamily. | Autophagy-related protein 3. | 0.869 |
A0A544ZSS5 | A0A545A5C7 | L-lactate dehydrogenase; Belongs to the LDH/MDH superfamily. | Dihydrolipoyl dehydrogenase. | 0.728 |
A0A544ZSS5 | A0A545A7D9 | L-lactate dehydrogenase; Belongs to the LDH/MDH superfamily. | Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. | 0.899 |
A0A544ZSS5 | A0A545AAB4 | L-lactate dehydrogenase; Belongs to the LDH/MDH superfamily. | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.595 |
A0A544ZSS5 | A0A545AB87 | L-lactate dehydrogenase; Belongs to the LDH/MDH superfamily. | Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway. | 0.863 |
A0A544ZVR2 | A0A544ZSS5 | Fe-ADH domain-containing protein. | L-lactate dehydrogenase; Belongs to the LDH/MDH superfamily. | 0.539 |
A0A544ZVR2 | A0A544ZZR1 | Fe-ADH domain-containing protein. | Uncharacterized protein. | 0.983 |
A0A544ZVR2 | A0A545A284 | Fe-ADH domain-containing protein. | Uncharacterized protein. | 0.905 |
A0A544ZVR2 | A0A545A2H0 | Fe-ADH domain-containing protein. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.465 |
A0A544ZVR2 | A0A545A2T3 | Fe-ADH domain-containing protein. | Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family. | 0.554 |
A0A544ZVR2 | A0A545A4G4 | Fe-ADH domain-containing protein. | Autophagy-related protein 3. | 0.757 |
A0A544ZVR2 | A0A545A5C7 | Fe-ADH domain-containing protein. | Dihydrolipoyl dehydrogenase. | 0.513 |
A0A544ZVR2 | A0A545A7D9 | Fe-ADH domain-containing protein. | Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate. | 0.588 |
A0A544ZVR2 | A0A545AAB4 | Fe-ADH domain-containing protein. | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.854 |
A0A544ZZR1 | A0A544ZVR2 | Uncharacterized protein. | Fe-ADH domain-containing protein. | 0.983 |
A0A544ZZR1 | A0A545A284 | Uncharacterized protein. | Uncharacterized protein. | 0.883 |
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