A0A545A9H4 protein (Golovinomyces magnicellulatus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A545A9H4

Uncharacterized protein. (887 aa)

Predicted Functional Partners:

A0A545A799

0.983

A0A544ZT29

0.972

A0A544ZV22

0.970

A0A545A650

0.970

A0A544ZZD5

0.967

A0A544ZWL1

0.966

A0A545A793

0.966

A0A545A2J5

0.911

A0A544ZWZ7

0.907

A0A545ABI0

0.907

Your Current Organism:

Golovinomyces magnicellulatus

NCBI taxonomy Id: 62714
Other names: Erysiphe magnacellulata, G. magnicellulatus

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A544ZT29	A0A544ZV22	t-SNARE coiled-coil homology domain-containing protein.	Uncharacterized protein.	0.988
A0A544ZT29	A0A544ZWL1	t-SNARE coiled-coil homology domain-containing protein.	Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.	0.988
A0A544ZT29	A0A544ZWZ7	t-SNARE coiled-coil homology domain-containing protein.	Uncharacterized protein.	0.868
A0A544ZT29	A0A544ZZD5	t-SNARE coiled-coil homology domain-containing protein.	Uncharacterized protein.	0.899
A0A544ZT29	A0A545A2J5	t-SNARE coiled-coil homology domain-containing protein.	Uncharacterized protein.	0.632
A0A544ZT29	A0A545A650	t-SNARE coiled-coil homology domain-containing protein.	Protein transport protein BOS1; SNARE required for protein transport between the ER and the Golgi complex.	0.988
A0A544ZT29	A0A545A793	t-SNARE coiled-coil homology domain-containing protein.	Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.	0.988
A0A544ZT29	A0A545A799	t-SNARE coiled-coil homology domain-containing protein.	t-SNARE coiled-coil homology domain-containing protein.	0.998
A0A544ZT29	A0A545A9H4	t-SNARE coiled-coil homology domain-containing protein.	Uncharacterized protein.	0.972
A0A544ZT29	A0A545ABI0	t-SNARE coiled-coil homology domain-containing protein.	Uncharacterized protein.	0.868
A0A544ZV22	A0A544ZT29	Uncharacterized protein.	t-SNARE coiled-coil homology domain-containing protein.	0.988
A0A544ZV22	A0A544ZWL1	Uncharacterized protein.	Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.	0.979
A0A544ZV22	A0A544ZWZ7	Uncharacterized protein.	Uncharacterized protein.	0.777
A0A544ZV22	A0A544ZZD5	Uncharacterized protein.	Uncharacterized protein.	0.982
A0A544ZV22	A0A545A2J5	Uncharacterized protein.	Uncharacterized protein.	0.617
A0A544ZV22	A0A545A793	Uncharacterized protein.	Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.	0.979
A0A544ZV22	A0A545A799	Uncharacterized protein.	t-SNARE coiled-coil homology domain-containing protein.	0.988
A0A544ZV22	A0A545A9H4	Uncharacterized protein.	Uncharacterized protein.	0.970
A0A544ZV22	A0A545ABI0	Uncharacterized protein.	Uncharacterized protein.	0.777
A0A544ZWL1	A0A544ZT29	Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.	t-SNARE coiled-coil homology domain-containing protein.	0.988