STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLG_02520Hypothetical protein. (950 aa)    
Predicted Functional Partners:
SLG_19840
Type IV secretory pathway VirB4 component.
 
  
 0.804
SLG_19920
Mating pair stabilization protein TraN.
 
  
 0.780
SLG_19950
Thioredoxin-related protein.
 
   
 0.773
SLG_19910
Putative exported protein.
  
     0.768
SLG_19890
Plasmid transfer protein TraW.
  
   
 0.761
SLG_30400
Conserved hypothetical protein.
 
  
 0.759
SLG_19820
Conjugal transfer protein TraB.
  
     0.748
SLG_19900
Conjugal transfer protein TraU.
  
     0.719
SLG_26810
Hypothetical protein.
  
 0.706
SLG_19770
Putative protein-disulfide isomerase; Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process; Belongs to the thioredoxin family. DsbC subfamily.
 
     0.679
Your Current Organism:
Sphingobium sp. SYK6
NCBI taxonomy Id: 627192
Other names: S. sp. SYK-6, Sphingobium sp. SYK-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.