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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
paaH3-hydroxybutyryl-CoA dehydrogenase. (289 aa)    
Predicted Functional Partners:
SLG_15980
enoyl-CoA hydratase; Protein synonym:unsaturated acyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
 0.998
SLG_24630
Protein synonym:acetoacetyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
 0.983
SLG_31440
Protein synonym:acetoacetyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
 0.982
SLG_21370
acetyl-CoA acyltransferase; Protein synonym:3-ketoacyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
 0.977
SLG_24730
Protein synonym:acetoacetyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
 0.977
SLG_24710
enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.963
ferB2
feruloyl-CoA hydratase/lyase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.957
fadJ
Fatty oxidation complex alpha subunit; Protein synonym:3-hydroxyacyl-CoA dehydrogenase.
 
0.931
scoB
3-oxoacid CoA-transferase subunit B; Protein synonym:acetoacetate succinyl-CoA transferase; protein synonym:succinyl-CoA--3-ketoacid-CoA transferase.
  
 
 0.918
SLG_31470
3-oxoadipate CoA-transferase beta subunit.
  
 
 0.918
Your Current Organism:
Sphingobium sp. SYK6
NCBI taxonomy Id: 627192
Other names: S. sp. SYK-6, Sphingobium sp. SYK-6
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