STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLG_03380Hypothetical protein. (518 aa)    
Predicted Functional Partners:
SLG_34310
Conserved hypothetical membrane protein.
  
     0.702
SLG_00650
Hypothetical protein.
  
     0.687
SLG_03820
Hypothetical protein.
  
     0.672
gspH
General secretion pathway protein H.
  
     0.672
SLG_32840
Hypothetical protein.
  
 
 0.665
SLG_04430
YapH-family protein.
  
    0.656
SLG_03370
Extradiol dioxygenase.
       0.645
gspC
Putative general secretion pathway protein C.
  
     0.643
gspL
Putative general secretion pathway protein L.
  
     0.622
SLG_38940
ABC transporter auxiliary protein.
  
 
   0.622
Your Current Organism:
Sphingobium sp. SYK6
NCBI taxonomy Id: 627192
Other names: S. sp. SYK-6, Sphingobium sp. SYK-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.