STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLG_04020Hypothetical protein. (219 aa)    
Predicted Functional Partners:
ctrA
Putative cell cycle transcriptional regulator CtrA.
  
 0.953
SLG_28990
Response regulator receiver protein.
  
 0.943
SLG_15190
Putative two-component system hybrid sensor and regulator.
  
 0.939
SLG_04030
Peptidase M67 family protein.
 
     0.784
cheA
Chemotaxis protein CheA.
  
 
 0.781
SLG_04000
Chemotaxis signal transduction protein.
       0.716
cheY
Chemotaxis protein CheY.
 
     0.715
SLG_31660
Putative oxidoreductase.
  
     0.679
SLG_14600
Putative two-component system sensor histidine kinase.
  
 
 0.673
SLG_04170
Cell division protein.
  
     0.669
Your Current Organism:
Sphingobium sp. SYK6
NCBI taxonomy Id: 627192
Other names: S. sp. SYK-6, Sphingobium sp. SYK-6
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.