STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLG_04280Hypothetical protein. (185 aa)    
Predicted Functional Partners:
SLG_04270
Conserved hypothetical protein; Belongs to the CinA family.
       0.636
SLG_36080
Putative glutathione S-transferase.
  
     0.624
SLG_22030
Putative phage-related protein.
  
     0.611
SLG_16470
Hypothetical membrane protein.
  
     0.519
SLG_22010
Putative portal protein.
  
     0.508
SLG_10380
Hypothetical protein.
  
     0.503
SLG_22070
Conserved hypothetical protein.
  
     0.502
SLG_31000
Heavy metal resistance protein.
  
     0.486
SLG_32170
Putative glycosyltransferase.
  
     0.425
SLG_16770
LuxR family transcriptional regulator.
  
     0.421
Your Current Organism:
Sphingobium sp. SYK6
NCBI taxonomy Id: 627192
Other names: S. sp. SYK-6, Sphingobium sp. SYK-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.