SLG_04320 protein (Sphingobium sp. SYK6) - STRING interaction network

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second shell of interactors

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Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

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protein homology

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Score

SLG_04320

Putative iron uptake protein. (388 aa)

Predicted Functional Partners:

SLG_04340

0.963

SLG_10860

0.827

SLG_04330

0.797

SLG_04360

0.745

SLG_17010

0.699

SLG_17080

0.579

SLG_34070

0.515

SLG_04290

0.509

SLG_04300

0.509

ku

0.509

Your Current Organism:

Sphingobium sp. SYK6

NCBI taxonomy Id: 627192
Other names: S. sp. SYK-6, Sphingobium sp. SYK-6

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SLG_04290	SLG_04300	SLG_04290	SLG_04300	Putative DNA ligase.	MgtC/SapB family transporter.	0.860
SLG_04290	SLG_04320	SLG_04290	SLG_04320	Putative DNA ligase.	Putative iron uptake protein.	0.509
SLG_04290	SLG_04330	SLG_04290	SLG_04330	Putative DNA ligase.	Hypothetical protein.	0.509
SLG_04290	SLG_04340	SLG_04290	SLG_04340	Putative DNA ligase.	TonB-dependent receptor-like protein.	0.509
SLG_04290	ku	SLG_04290	SLG_04310	Putative DNA ligase.	Ku protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family.	0.990
SLG_04300	SLG_04290	SLG_04300	SLG_04290	MgtC/SapB family transporter.	Putative DNA ligase.	0.860
SLG_04300	SLG_04320	SLG_04300	SLG_04320	MgtC/SapB family transporter.	Putative iron uptake protein.	0.509
SLG_04300	SLG_04330	SLG_04300	SLG_04330	MgtC/SapB family transporter.	Hypothetical protein.	0.509
SLG_04300	SLG_04340	SLG_04300	SLG_04340	MgtC/SapB family transporter.	TonB-dependent receptor-like protein.	0.509
SLG_04300	ku	SLG_04300	SLG_04310	MgtC/SapB family transporter.	Ku protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family.	0.791
SLG_04320	SLG_04290	SLG_04320	SLG_04290	Putative iron uptake protein.	Putative DNA ligase.	0.509
SLG_04320	SLG_04300	SLG_04320	SLG_04300	Putative iron uptake protein.	MgtC/SapB family transporter.	0.509
SLG_04320	SLG_04330	SLG_04320	SLG_04330	Putative iron uptake protein.	Hypothetical protein.	0.797
SLG_04320	SLG_04340	SLG_04320	SLG_04340	Putative iron uptake protein.	TonB-dependent receptor-like protein.	0.963
SLG_04320	SLG_04360	SLG_04320	SLG_04360	Putative iron uptake protein.	ferredoxin-NADP+ reductase.	0.745
SLG_04320	SLG_10860	SLG_04320	SLG_10860	Putative iron uptake protein.	TonB-dependent receptor-like protein.	0.827
SLG_04320	SLG_17010	SLG_04320	SLG_17010	Putative iron uptake protein.	TonB-dependent receptor-like protein.	0.699
SLG_04320	SLG_17080	SLG_04320	SLG_17080	Putative iron uptake protein.	TonB-dependent receptor-like protein.	0.579
SLG_04320	SLG_34070	SLG_04320	SLG_34070	Putative iron uptake protein.	TonB-dependent receptor-like protein.	0.515
SLG_04320	ku	SLG_04320	SLG_04310	Putative iron uptake protein.	Ku protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family.	0.509