STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLG_07510Efflux pump outer membrane protein. (476 aa)    
Predicted Functional Partners:
SLG_07490
Efflux pump periplasmic linker protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.990
SLG_07500
Efflux pump inner membrane protein.
 0.990
SLG_03790
Efflux pump inner membrane protein.
 0.963
SLG_03800
Efflux pump periplasmic linker protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.960
SLG_03780
Efflux pump outer membrane protein.
  
  
 
0.913
SLG_06940
Efflux pump outer membrane protein.
  
  
 
0.912
SLG_29250
Efflux pump inner membrane protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.861
SLG_29240
Efflux pump periplasmic linker protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 0.846
SLG_23680
Multidrug resistance protein A.
 
 
 0.673
SLG_34620
Putative efflux pump inner membrane protein.
 
 0.663
Your Current Organism:
Sphingobium sp. SYK6
NCBI taxonomy Id: 627192
Other names: S. sp. SYK-6, Sphingobium sp. SYK-6
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