Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SLG_07580Putative dioxygenase. (446 aa)    
Predicted Functional Partners:
SLG_16650
Aromatic-ring-hydroxylating dioxygenase beta subunit.
 
 0.936
SLG_19120
Phthalate 4,5-dioxygenase.
 
  
 
0.919
SLG_07590
Serine--glyoxylate aminotransferase.
 
     0.748
SLG_07570
Putative GntR family transcriptional regulator.
  
  
 0.562
SLG_35030
acetyl-CoA C-acetyltransferase.
  
  
 0.552
SLG_07690
Hypothetical protein.
 
    0.549
SLG_07600
Major facilitator superfamily protein.
     
 0.543
SLG_07680
Hypothetical protein.
  
  
 0.535
SLG_35040
Hypothetical protein.
 
    0.479
SLG_11270
Conserved hypothetical protein.
  
   
 0.448
Your Current Organism:
Sphingobium sp. SYK6
NCBI taxonomy Id: 627192
Other names: S. sp. SYK-6, Sphingobium sp. SYK-6
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