STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLG_07680Hypothetical protein. (390 aa)    
Predicted Functional Partners:
fadJ
Fatty oxidation complex alpha subunit; Protein synonym:3-hydroxyacyl-CoA dehydrogenase.
 
 0.993
SLG_07690
Hypothetical protein.
 
 
 0.979
SLG_35040
Hypothetical protein.
 
 
 0.916
SLG_07670
Putative enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.900
SLG_07660
acyl-CoA synthetase; Protein synonym:fatty-acid--CoA ligase.
 
    0.836
SLG_07640
acyl-CoA dehydrogenase.
 
 0.834
SLG_07700
Putative esterase.
  
  
 0.774
paaH
3-hydroxybutyryl-CoA dehydrogenase.
  
 0.744
SLG_18380
Putative oxidoreductase.
 
 0.729
SLG_19000
Putative acyl-CoA dehydrogenase.
 
 0.724
Your Current Organism:
Sphingobium sp. SYK6
NCBI taxonomy Id: 627192
Other names: S. sp. SYK-6, Sphingobium sp. SYK-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.