STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLG_07710Major facilitator superfamily protein. (439 aa)    
Predicted Functional Partners:
SLG_14280
Major facilitator superfamily protein.
  
     0.764
SLG_07680
Hypothetical protein.
 
     0.626
SLG_07690
Hypothetical protein.
 
     0.612
SLG_07700
Putative esterase.
       0.539
SLG_07660
acyl-CoA synthetase; Protein synonym:fatty-acid--CoA ligase.
       0.535
SLG_07670
Putative enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
       0.535
SLG_11350
Major facilitator superfamily protein.
  
   
0.514
ligZ
2,2',3-trihydroxy-3'-methoxy-5, 5'-dicarboxybiphenyl dioxygenase.
       0.511
SLG_07730
Hypothetical protein.
       0.459
SLG_07740
Putative aldolase.
       0.459
Your Current Organism:
Sphingobium sp. SYK6
NCBI taxonomy Id: 627192
Other names: S. sp. SYK-6, Sphingobium sp. SYK-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.