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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLG_07970Heavy metal efflux system protein. (404 aa)    
Predicted Functional Partners:
SLG_08000
Heavy metal efflux system protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.928
SLG_07990
Heavy metal efflux system protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
  
 0.896
SLG_07980
Hypothetical protein.
       0.788
SLG_29170
Heavy metal efflux system protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.751
SLG_29120
Conjugal transfer protein TraA.
  
     0.716
SLG_28800
TonB-dependent receptor-like protein.
  
     0.687
SLG_23300
Hypothetical protein.
  
     0.685
SLG_32170
Putative glycosyltransferase.
  
     0.658
SLG_03360
Putative 2'-5' RNA ligase.
  
     0.594
SLG_08010
OmpR family two-component system response regulator.
  
   0.585
Your Current Organism:
Sphingobium sp. SYK6
NCBI taxonomy Id: 627192
Other names: S. sp. SYK-6, Sphingobium sp. SYK-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.