Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SLG_08010OmpR family two-component system response regulator. (217 aa)    
Predicted Functional Partners:
SLG_08020
Two-component system sensor histidine kinase.
 
 
 0.930
SLG_29180
Two-component system sensor histidine kinase.
 
 
 0.819
SLG_02230
Two-component system sensor histidine kinase.
 
 
 0.804
SLG_03100
Two-component system sensor histidine kinase.
 
 
 0.796
SLG_01090
Putative two-component system hybrid sensor and regulator.
 
 
 0.795
SLG_13220
Two-component system sensor histidine kinase.
 
 
 0.792
phoR
Putative phosphate regulon sensor protein PhoR.
 
 
 0.791
SLG_20960
Putative two-component system sensor histidine kinase.
 
 
 0.776
SLG_13300
Two-component system sensor histidine kinase.
 
 
 0.773
SLG_29960
Two-component system sensor histidine kinase.
 
 
 0.760
Your Current Organism:
Sphingobium sp. SYK6
NCBI taxonomy Id: 627192
Other names: S. sp. SYK-6, Sphingobium sp. SYK-6
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