STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLG_08720Hypothetical protein. (242 aa)    
Predicted Functional Partners:
SLG_08690
Putative glycosyltransferase.
 
    0.852
SLG_08710
Putative glycosyltransferase.
 
    0.811
SLG_28790
Hypothetical protein.
  
     0.688
SLG_08700
Hypothetical membrane protein.
       0.646
SLG_28800
TonB-dependent receptor-like protein.
  
     0.645
SLG_33870
Hypothetical membrane protein.
 
     0.620
SLG_33880
Hypothetical membrane protein.
 
     0.592
SLG_14510
Hypothetical protein.
  
     0.578
SLG_08680
Hypothetical protein.
 
     0.546
SLG_15760
Conserved hypothetical membrane protein.
  
     0.500
Your Current Organism:
Sphingobium sp. SYK6
NCBI taxonomy Id: 627192
Other names: S. sp. SYK-6, Sphingobium sp. SYK-6
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.