Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SLG_09760LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (298 aa)    
Predicted Functional Partners:
SLG_36770
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.730
SLG_10900
Putative LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.724
ligR
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.648
SLG_27460
Putative LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.643
SLG_28060
Putative LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.626
SLG_30820
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.580
SLG_09750
isovaleryl-CoA dehydrogenase.
  
    0.561
gltB
Glutamate synthase (NADPH) large chain.
     
 0.513
SLG_09770
Conserved hypothetical protein.
       0.479
SLG_12360
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.464
Your Current Organism:
Sphingobium sp. SYK6
NCBI taxonomy Id: 627192
Other names: S. sp. SYK-6, Sphingobium sp. SYK-6
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