STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLG_14280Major facilitator superfamily protein. (405 aa)    
Predicted Functional Partners:
SLG_07600
Major facilitator superfamily protein.
  
     0.768
SLG_07710
Major facilitator superfamily protein.
  
     0.764
SLG_14290
Conserved hypothetical protein.
 
     0.761
pcaC
4-carboxymuconolactone decarboxylase.
       0.698
SLG_14310
TonB-dependent receptor-like protein.
       0.688
SLG_11350
Major facilitator superfamily protein.
  
     0.629
SLG_27310
Conserved hypothetical protein.
  
     0.511
SLG_14320
Putative LuxR family transcriptional regulator.
       0.486
Your Current Organism:
Sphingobium sp. SYK6
NCBI taxonomy Id: 627192
Other names: S. sp. SYK-6, Sphingobium sp. SYK-6
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.