STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ptsHPhosphocarrier protein HPr. (88 aa)    
Predicted Functional Partners:
SLG_14750
PTS system IIA component.
 
 0.997
SLG_14770
HPr kinase/phosphorylase.
 
 
 
 0.961
ptsP
Phosphoenolpyruvate-protein phosphotransferase PtsP; Belongs to the PEP-utilizing enzyme family.
  
 
 
 0.935
SLG_14760
Putative P-loop-containing ATPase; Displays ATPase and GTPase activities.
  
  
 0.903
SLG_14780
Two-component system sensor histidine kinase.
     
 0.863
SLG_14790
OmpR family two-component system response regulator.
  
  
 0.861
SLG_14730
RNA methyltransferase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.
       0.852
ptsN
PTS IIA-like nitrogen-regulatory protein PtsN.
 
  
 0.842
SLG_38110
LacI family transcriptional regulator.
 
 
 
 0.778
SLG_08180
LacI family transcriptional regulator.
 
 
 
 0.777
Your Current Organism:
Sphingobium sp. SYK6
NCBI taxonomy Id: 627192
Other names: S. sp. SYK-6, Sphingobium sp. SYK-6
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