STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLG_14840Putative M28 family peptidase. (571 aa)    
Predicted Functional Partners:
SLG_25090
TonB-dependent receptor-like protein.
  
     0.706
SLG_25150
TonB-dependent receptor-like protein.
  
     0.702
SLG_26390
TonB-dependent receptor-like protein.
  
     0.700
SLG_02250
TonB-dependent receptor-like protein.
  
     0.696
SLG_27490
TonB-dependent receptor-like protein.
  
     0.689
SLG_31220
TonB-dependent receptor-like protein.
  
     0.686
SLG_28190
TonB-dependent receptor-like protein.
  
     0.681
SLG_31370
TonB-dependent receptor-like protein.
  
     0.675
SLG_34920
TonB-dependent receptor-like protein.
  
     0.674
SLG_27590
TonB-dependent receptor-like protein.
  
     0.673
Your Current Organism:
Sphingobium sp. SYK6
NCBI taxonomy Id: 627192
Other names: S. sp. SYK-6, Sphingobium sp. SYK-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.