STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLG_18890Putative 3-oxoacyl-[acyl-carrier-protein] reductase; Protein synonym:3-ketoacyl-ACP reductase. (249 aa)    
Predicted Functional Partners:
SLG_12600
SDR-family protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
     0.641
SLG_28310
Putative oxidoreductase.
  
    0.605
fabF
3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
 
 
 0.469
SLG_18880
Putative iron-sulfur protein.
     
 0.453
SLG_20410
Putative 6-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family.
   
  
 0.426
SLG_18840
Ferredoxin.
  
 
 0.423
gltB
Glutamate synthase (NADPH) large chain.
      
 0.422
fabD
[acyl-carrier-protein] S-malonyltransferase.
 
 
 0.413
Your Current Organism:
Sphingobium sp. SYK6
NCBI taxonomy Id: 627192
Other names: S. sp. SYK-6, Sphingobium sp. SYK-6
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