STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLG_19600ParB-like protein; Belongs to the ParB family. (680 aa)    
Predicted Functional Partners:
SLG_19610
Virulence-associated protein E.
 
     0.753
SLG_19890
Plasmid transfer protein TraW.
  
     0.687
SLG_20660
ParA-like protein.
 
 
 0.685
parA
Chromosome partitioning protein ParA.
 
 
 0.639
SLG_19210
Hypothetical protein.
 
     0.598
SLG_19220
Hypothetical protein.
 
     0.577
SLG_19920
Mating pair stabilization protein TraN.
  
     0.556
SLG_19820
Conjugal transfer protein TraB.
  
     0.555
SLG_19840
Type IV secretory pathway VirB4 component.
 
   
 0.551
SLG_30550
Hypothetical protein.
  
     0.546
Your Current Organism:
Sphingobium sp. SYK6
NCBI taxonomy Id: 627192
Other names: S. sp. SYK-6, Sphingobium sp. SYK-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.