Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
SLG_20170Putative oxidoreductase. (547 aa)    
Predicted Functional Partners:
SLG_20150
Putative cytochrome P450.
     
 0.616
SLG_20130
3-hydroxyisobutyrate dehydrogenase-related protein.
  
    0.604
SLG_20140
Putative hydrolase.
       0.588
SLG_20160
Putative hydrolase.
       0.588
SLG_20180
Hypothetical protein.
       0.518
SLG_20120
Putative hydrolase.
 
     0.499
SLG_28970
Conserved hypothetical protein.
  
 
  0.445
SLG_20200
Mg-dependent DNase.
     
 0.442
metG
methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family. MetG type 2B subfamily.
     
 0.442
SLG_20190
Putative hydrolase.
     
 0.437
Your Current Organism:
Sphingobium sp. SYK6
NCBI taxonomy Id: 627192
Other names: S. sp. SYK-6, Sphingobium sp. SYK-6
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