STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLG_21600Hypothetical protein. (289 aa)    
Predicted Functional Partners:
SLG_21590
Putative hydrolase.
 
     0.780
SLG_15030
Hypothetical protein.
  
     0.758
SLG_32280
Hypothetical protein.
  
     0.751
SLG_08430
Hypothetical protein.
  
     0.744
SLG_05710
Hypothetical protein.
  
     0.738
SLG_23940
Hypothetical protein.
  
     0.735
SLG_17680
Hypothetical protein.
  
     0.731
SLG_29680
Putative Xre family transcriptional regulator.
  
     0.725
SLG_00470
Hypothetical membrane protein.
  
    0.723
pspB
Phage shock protein B.
  
     0.722
Your Current Organism:
Sphingobium sp. SYK6
NCBI taxonomy Id: 627192
Other names: S. sp. SYK-6, Sphingobium sp. SYK-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.