STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLG_26560Putative nuclease. (159 aa)    
Predicted Functional Partners:
SLG_23300
Hypothetical protein.
  
     0.557
SLG_08250
Putative membrane protein.
  
     0.511
gltB
Glutamate synthase (NADPH) large chain.
     
 0.504
SLG_23960
Flp pilus assembly protein TadG.
  
    0.468
ribD
Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
  
  
 0.452
SLG_19600
ParB-like protein; Belongs to the ParB family.
 
     0.428
SLG_29120
Conjugal transfer protein TraA.
 
     0.416
SLG_19300
Hypothetical protein.
 
     0.410
SLG_24310
Hypothetical protein.
  
     0.408
SLG_19210
Hypothetical protein.
  
     0.407
Your Current Organism:
Sphingobium sp. SYK6
NCBI taxonomy Id: 627192
Other names: S. sp. SYK-6, Sphingobium sp. SYK-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.