STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLG_28630Glyoxalase-family protein. (302 aa)    
Predicted Functional Partners:
SLG_28620
Putative oxidoreductase.
 
   
 0.939
SLG_16640
Aromatic-ring-hydroxylating dioxygenase alpha subunit.
 
  
 0.741
SLG_28610
Conserved hypothetical protein.
     
 0.738
SLG_28640
TonB-dependent receptor-like protein.
 
     0.647
SLG_16650
Aromatic-ring-hydroxylating dioxygenase beta subunit.
 
   
 0.633
pobA
P-hydroxybenzoate 3-monooxygenase.
 
   
 0.613
SLG_18880
Putative iron-sulfur protein.
 
  
 0.566
SLG_18370
Putative iron-sulfur protein.
 
     0.547
SLG_12560
Hypothetical protein.
 
   
 0.542
SLG_32620
Putative iron-sulfur protein.
 
     0.534
Your Current Organism:
Sphingobium sp. SYK6
NCBI taxonomy Id: 627192
Other names: S. sp. SYK-6, Sphingobium sp. SYK-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.