STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLG_28640TonB-dependent receptor-like protein. (815 aa)    
Predicted Functional Partners:
SLG_09330
TonB-dependent receptor-like protein.
  
    0.768
SLG_34990
TonB-dependent receptor-like protein.
  
    0.765
SLG_28830
TonB-dependent receptor-like protein.
  
    0.763
SLG_27590
TonB-dependent receptor-like protein.
  
    0.759
SLG_25080
TonB-dependent receptor-like protein.
  
    0.758
SLG_27320
TonB-dependent receptor-like protein.
  
    0.756
SLG_07650
TonB-dependent receptor-like protein.
  
    0.752
SLG_34920
TonB-dependent receptor-like protein.
  
    0.747
SLG_02250
TonB-dependent receptor-like protein.
  
    0.746
SLG_10860
TonB-dependent receptor-like protein.
  
  
 0.745
Your Current Organism:
Sphingobium sp. SYK6
NCBI taxonomy Id: 627192
Other names: S. sp. SYK-6, Sphingobium sp. SYK-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.