STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLG_31270Beta-ketoadipate enol-lactone hydrolase. (258 aa)    
Predicted Functional Partners:
pcaC-2
4-carboxymuconolactone decarboxylase.
 
 0.992
SLG_27270
Beta-ketoadipate enol-lactone hydrolase.
 
 
0.925
pcaC
4-carboxymuconolactone decarboxylase.
 
 
 0.924
SLG_31320
Conserved hypothetical protein.
  
 
 0.912
SLG_28160
Putative alpha/beta hydrolase.
 
  
 0.738
SLG_31360
Conserved hypothetical protein.
 
  
 0.733
SLG_31260
Putative phthalate transporter.
       0.597
pobA
P-hydroxybenzoate 3-monooxygenase.
 
  
 0.513
purB
Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
  
  
 0.510
fadJ
Fatty oxidation complex alpha subunit; Protein synonym:3-hydroxyacyl-CoA dehydrogenase.
  
 
 0.455
Your Current Organism:
Sphingobium sp. SYK6
NCBI taxonomy Id: 627192
Other names: S. sp. SYK-6, Sphingobium sp. SYK-6
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