STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLG_31710Putative hydrolase. (496 aa)    
Predicted Functional Partners:
SLG_19720
Conserved hypothetical protein.
 
     0.628
SLG_32170
Putative glycosyltransferase.
  
     0.566
crtY
Putative lycopene beta cyclase.
       0.538
SLG_31730
Phytoene dehydrogenase.
       0.538
SLG_31740
Conserved hypothetical protein; Belongs to the LOG family.
       0.538
SLG_13250
Putative hydrolase.
  
     0.521
SLG_31700
Sterol desaturase.
       0.521
SLG_07050
Hypothetical protein.
 
     0.506
SLG_36460
Hypothetical protein.
  
     0.504
SLG_26890
Putative peptidase.
 
     0.491
Your Current Organism:
Sphingobium sp. SYK6
NCBI taxonomy Id: 627192
Other names: S. sp. SYK-6, Sphingobium sp. SYK-6
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.