STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
etfBProtein synonym:electron transfer flavoprotein small subunit. (249 aa)    
Predicted Functional Partners:
etfA
Protein synonym:electron transfer flavoprotein large subunit.
 0.999
SLG_24540
Electron-transferring-flavoprotein dehydrogenase; Accepts electrons from ETF and reduces ubiquinone.
 
 0.998
SLG_05600
Putative acyl-CoA dehydrogenase.
 
 
 0.855
SLG_09750
isovaleryl-CoA dehydrogenase.
 
 
 0.851
SLG_07630
Putative acyl-CoA dehydrogenase.
 
 
 0.831
fadJ
Fatty oxidation complex alpha subunit; Protein synonym:3-hydroxyacyl-CoA dehydrogenase.
  
 
 0.831
SLG_13500
acyl-CoA dehydrogenase.
 
 
 0.818
SLG_07640
acyl-CoA dehydrogenase.
 
 
 0.768
SLG_07160
Putative oxidoreductase.
  
 
 0.751
sucC
succinyl-CoA synthetase beta chain; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit.
  
 
 0.721
Your Current Organism:
Sphingobium sp. SYK6
NCBI taxonomy Id: 627192
Other names: S. sp. SYK-6, Sphingobium sp. SYK-6
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