STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ggt-3Gamma-glutamyltranspeptidase. (614 aa)    
Predicted Functional Partners:
ggt-2
Gamma-glutamyltranspeptidase.
  
  
 
0.928
ggt
Gamma-glutamyltranspeptidase.
  
  
 
0.926
pepA
Aminopeptidase A; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.
  
 
 0.921
SLG_32850
Putative M17 family peptidase; Belongs to the peptidase M17 family.
  
  
 0.920
pepA-2
Aminopeptidase A; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.
  
 
 0.919
SLG_23620
Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily.
  
  
  0.911
gshB
Glutathione synthase; Belongs to the prokaryotic GSH synthase family.
    
 0.911
SLG_23310
Glutathione peroxidase; Belongs to the glutathione peroxidase family.
     
 0.909
SLG_24760
Glutathione reductase (NADPH).
     
 0.909
SLG_36780
N-methylhydantoinase A.
    
 0.908
Your Current Organism:
Sphingobium sp. SYK6
NCBI taxonomy Id: 627192
Other names: S. sp. SYK-6, Sphingobium sp. SYK-6
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