STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLG_33650Putative threonine synthase. (407 aa)    
Predicted Functional Partners:
SLG_11820
Putative threonine hydratase.
 
 
 0.959
SLG_24380
Putative L-threo-3-hydroxy aspartate dehydratase; Protein synonym:threo-3-hydroxyaspartate ammonia-lyase.
 
 
 0.951
SLG_32560
Threonine dehydratase.
 
 
 0.947
SLG_25780
Putative threonine dehydratase.
 
 
0.941
serC
Phosphoserine aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine.
   
 0.932
ltaA
Threonine aldolase.
  
 0.921
thrB
Homoserine kinase type II; Belongs to the pseudomonas-type ThrB family.
    
 0.912
pdxA
4-hydroxythreonine-4-phosphate dehydrogenase; Catalyzes the NAD(P)-dependent oxidation of 4-(phosphooxy)-L- threonine (HTP) into 2-amino-3-oxo-4-(phosphooxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP).
    
  0.903
thrC
Threonine synthase.
     
  0.900
gltB
Glutamate synthase (NADPH) large chain.
  
  
 0.691
Your Current Organism:
Sphingobium sp. SYK6
NCBI taxonomy Id: 627192
Other names: S. sp. SYK-6, Sphingobium sp. SYK-6
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