Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SLG_34880Putative oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (236 aa)    
Predicted Functional Partners:
SLG_34870
Hypothetical protein.
       0.741
SLG_20040
LinC-like SDR-family protein.
  
     0.719
SLG_35070
Short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
  0.715
SLG_12690
Putative oxidoreductase.
  
     0.712
ligO
C alpha-dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
  0.695
SLG_20080
LinC-like SDR-family protein.
  
     0.684
ligN
C alpha-dehydrogenase.
  
 
  0.672
ligD
C alpha-dehydrogenase; Catalyzes the C alpha dehydrogenation of arylglycerol-beta- aryl ether (C alpha alcohol type) (compound IV); Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
  0.577
SLG_04950
Short-chain dehydrogenase/reductase SDR.
  
     0.563
SLG_34860
Hypothetical protein.
       0.545
Your Current Organism:
Sphingobium sp. SYK6
NCBI taxonomy Id: 627192
Other names: S. sp. SYK-6, Sphingobium sp. SYK-6
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