Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SLG_36760TonB-dependent receptor-like protein. (836 aa)    
Predicted Functional Partners:
SLG_33080
OOP-family protein.
  
  
 0.673
SLG_36750
Hypothetical protein.
       0.570
SLG_34070
TonB-dependent receptor-like protein.
  
    0.550
SLG_26870
Putative anti-sigma factor.
 
  
 0.536
SLG_06600
TonB-dependent receptor-like protein.
  
     0.533
SLG_19700
Putative anti-sigma factor.
  
    0.527
SLG_28820
Putative anti-sigma factor.
 
  
 0.515
SLG_30040
Putative anti-sigma factor.
 
  
 0.512
SLG_36280
TonB-dependent receptor-like protein.
  
  
 0.510
SLG_32710
TonB-dependent receptor-like protein.
  
     0.507
Your Current Organism:
Sphingobium sp. SYK6
NCBI taxonomy Id: 627192
Other names: S. sp. SYK-6, Sphingobium sp. SYK-6
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.