STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLG_37720Hypothetical protein. (223 aa)    
Predicted Functional Partners:
SLG_37750
Lhr-like helicase.
 
    0.831
lig
DNA ligase.
 
   
 0.804
SLG_11080
Putative exonuclease.
 
     0.783
SLG_00110
Hypothetical protein.
  
     0.653
SLG_37710
TonB-dependent receptor-like protein.
       0.551
SLG_37730
Hypothetical protein; Belongs to the UPF0176 family.
       0.551
imuB-2
Protein ImuB.
  
     0.451
SLG_30890
Hypothetical protein.
  
     0.410
Your Current Organism:
Sphingobium sp. SYK6
NCBI taxonomy Id: 627192
Other names: S. sp. SYK-6, Sphingobium sp. SYK-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.