STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NAV_LOCUS2254ANK_REP_REGION domain-containing protein. (1056 aa)    
Predicted Functional Partners:
NAV_LOCUS3260
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
    
 0.861
NAV_LOCUS4790
CULLIN_2 domain-containing protein; Belongs to the cullin family.
   
 0.796
NAV_LOCUS6581
CULLIN_2 domain-containing protein; Belongs to the cullin family.
   
 0.796
NAV_LOCUS4446
Uncharacterized protein.
   
 0.786
NAV_LOCUS3969
Uncharacterized protein; Belongs to the DEAD box helicase family.
    
 
 0.786
NAV_LOCUS7331
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 0.780
NAV_LOCUS2593
Uncharacterized protein.
   
  0.720
NAV_LOCUS8039
FHA domain-containing protein.
   
  0.720
NAV_LOCUS2428
CS domain-containing protein.
    
  0.681
NAV_LOCUS5766
Uncharacterized protein.
    
 0.672
Your Current Organism:
Acanthocheilonema viteae
NCBI taxonomy Id: 6277
Other names: A. viteae, Dipetalonema viteae
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