STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NAV_LOCUS2641Peptidase_M14 domain-containing protein. (430 aa)    
Predicted Functional Partners:
NAV_LOCUS5229
Uncharacterized protein.
    
  0.945
NAV_LOCUS7836
TIR domain-containing protein.
     
 0.669
NAV_LOCUS1498
Arrestin_C domain-containing protein.
     
 0.653
NAV_LOCUS697
MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.
    
  0.640
NAV_LOCUS273
MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.
    
  0.640
NAV_LOCUS4482
ENTH domain-containing protein.
     
 0.635
NAV_LOCUS462
GAE domain-containing protein.
   
 
 0.625
NAV_LOCUS4294
Uncharacterized protein.
    
 0.625
NAV_LOCUS4267
Uncharacterized protein.
    
  0.624
NAV_LOCUS539
V-SNARE coiled-coil homology domain-containing protein.
     
 0.614
Your Current Organism:
Acanthocheilonema viteae
NCBI taxonomy Id: 6277
Other names: A. viteae, Dipetalonema viteae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.