STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NAV_LOCUS860Uncharacterized protein. (262 aa)    
Predicted Functional Partners:
NAV_LOCUS8207
Uncharacterized protein.
 
     0.919
NAV_LOCUS733
Tyrosine-protein kinase.
    
 0.812
NAV_LOCUS4827
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
 0.793
NAV_LOCUS5766
Uncharacterized protein.
    
 0.766
NAV_LOCUS1391
SH2 domain-containing protein.
 
      0.739
NAV_LOCUS5857
Uncharacterized protein.
    
 0.691
NAV_LOCUS3309
Uncharacterized protein.
    
 0.685
NAV_LOCUS3307
Uncharacterized protein.
    
 0.685
NAV_LOCUS6629
USP domain-containing protein; Belongs to the peptidase C19 family.
     
 0.607
NAV_LOCUS4736
Ubiquitin-like domain-containing protein.
    
  0.559
Your Current Organism:
Acanthocheilonema viteae
NCBI taxonomy Id: 6277
Other names: A. viteae, Dipetalonema viteae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.