Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
NAV_LOCUS10246 | NAV_LOCUS3852 | A0A498SYS7 | A0A498S6K5 | Uncharacterized protein. | Uncharacterized protein. | 0.838 |
NAV_LOCUS1496 | NAV_LOCUS3731 | A0A498S9W7 | A0A498SD85 | 6-phosphogluconolactonase; Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate. | Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | 0.959 |
NAV_LOCUS1496 | NAV_LOCUS3852 | A0A498S9W7 | A0A498S6K5 | 6-phosphogluconolactonase; Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate. | Uncharacterized protein. | 0.824 |
NAV_LOCUS1496 | NAV_LOCUS4069 | A0A498S9W7 | A0A498SBR2 | 6-phosphogluconolactonase; Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate. | BcrAD_BadFG domain-containing protein. | 0.932 |
NAV_LOCUS1496 | NAV_LOCUS5698 | A0A498S9W7 | A0A498SGQ7 | 6-phosphogluconolactonase; Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate. | DC_STAMP domain-containing protein. | 0.716 |
NAV_LOCUS164 | NAV_LOCUS2195 | A0A498S1L9 | A0A498S6X8 | PIG-P domain-containing protein. | Uncharacterized protein. | 0.975 |
NAV_LOCUS164 | NAV_LOCUS3852 | A0A498S1L9 | A0A498S6K5 | PIG-P domain-containing protein. | Uncharacterized protein. | 0.846 |
NAV_LOCUS164 | NAV_LOCUS4607 | A0A498S1L9 | A0A498SIS0 | PIG-P domain-containing protein. | Rhodanese domain-containing protein. | 0.957 |
NAV_LOCUS164 | NAV_LOCUS614 | A0A498S1L9 | A0A498S2V8 | PIG-P domain-containing protein. | Uncharacterized protein. | 0.964 |
NAV_LOCUS2195 | NAV_LOCUS164 | A0A498S6X8 | A0A498S1L9 | Uncharacterized protein. | PIG-P domain-containing protein. | 0.975 |
NAV_LOCUS2195 | NAV_LOCUS3731 | A0A498S6X8 | A0A498SD85 | Uncharacterized protein. | Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | 0.691 |
NAV_LOCUS2195 | NAV_LOCUS3852 | A0A498S6X8 | A0A498S6K5 | Uncharacterized protein. | Uncharacterized protein. | 0.852 |
NAV_LOCUS2195 | NAV_LOCUS4607 | A0A498S6X8 | A0A498SIS0 | Uncharacterized protein. | Rhodanese domain-containing protein. | 0.970 |
NAV_LOCUS2195 | NAV_LOCUS614 | A0A498S6X8 | A0A498S2V8 | Uncharacterized protein. | Uncharacterized protein. | 0.976 |
NAV_LOCUS3731 | NAV_LOCUS1496 | A0A498SD85 | A0A498S9W7 | Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | 6-phosphogluconolactonase; Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate. | 0.959 |
NAV_LOCUS3731 | NAV_LOCUS2195 | A0A498SD85 | A0A498S6X8 | Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | Uncharacterized protein. | 0.691 |
NAV_LOCUS3731 | NAV_LOCUS3852 | A0A498SD85 | A0A498S6K5 | Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | Uncharacterized protein. | 0.802 |
NAV_LOCUS3731 | NAV_LOCUS4069 | A0A498SD85 | A0A498SBR2 | Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | BcrAD_BadFG domain-containing protein. | 0.628 |
NAV_LOCUS3852 | NAV_LOCUS10246 | A0A498S6K5 | A0A498SYS7 | Uncharacterized protein. | Uncharacterized protein. | 0.838 |
NAV_LOCUS3852 | NAV_LOCUS1496 | A0A498S6K5 | A0A498S9W7 | Uncharacterized protein. | 6-phosphogluconolactonase; Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate. | 0.824 |
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