STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NAV_LOCUS451Uncharacterized protein. (136 aa)    
Predicted Functional Partners:
NAV_LOCUS748
Uncharacterized protein.
   
 0.888
NAV_LOCUS6767
Uncharacterized protein.
   
 0.864
NAV_LOCUS5105
Uncharacterized protein.
   
 0.863
NAV_LOCUS2707
Uncharacterized protein.
    
 0.846
NAV_LOCUS5489
Uncharacterized protein.
  
0.823
NAV_LOCUS6820
Uncharacterized protein.
   
 0.815
NAV_LOCUS9276
Uncharacterized protein.
   
 0.815
NAV_LOCUS638
Uncharacterized protein.
  
 0.807
NAV_LOCUS4497
Uncharacterized protein.
   
 0.789
NAV_LOCUS3172
Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.786
Your Current Organism:
Acanthocheilonema viteae
NCBI taxonomy Id: 6277
Other names: A. viteae, Dipetalonema viteae
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