STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NAV_LOCUS792RRM domain-containing protein. (108 aa)    
Predicted Functional Partners:
NAV_LOCUS6434
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.936
NAV_LOCUS6763
Uncharacterized protein.
   
 0.914
NAV_LOCUS4381
Uncharacterized protein.
   
 0.883
NAV_LOCUS1138
Uncharacterized protein.
   
 0.881
NAV_LOCUS5893
Uncharacterized protein.
   
 0.881
NAV_LOCUS5379
RRM domain-containing protein.
  
 0.867
NAV_LOCUS8419
Uncharacterized protein.
   
 0.866
NAV_LOCUS5958
Small nuclear ribonucleoprotein G.
   
 0.866
NAV_LOCUS2234
RRM domain-containing protein.
   
 0.864
NAV_LOCUS8028
RRM domain-containing protein.
   
 0.863
Your Current Organism:
Acanthocheilonema viteae
NCBI taxonomy Id: 6277
Other names: A. viteae, Dipetalonema viteae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.