STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NAV_LOCUS868Uncharacterized protein. (402 aa)    
Predicted Functional Partners:
NAV_LOCUS2402
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
   
 0.655
NAV_LOCUS5397
Uncharacterized protein.
   
 0.655
NAV_LOCUS6947
SAM domain-containing protein.
   
 
 0.646
NAV_LOCUS3969
Uncharacterized protein; Belongs to the DEAD box helicase family.
    
 0.632
NAV_LOCUS1486
Uncharacterized protein.
    
 0.620
NAV_LOCUS6486
Uncharacterized protein; Belongs to the DEAD box helicase family.
    
 0.620
NAV_LOCUS6013
Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.
    
 0.608
NAV_LOCUS8299
Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.
    
 0.608
NAV_LOCUS5002
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
  0.578
NAV_LOCUS7113
Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.
    
  0.555
Your Current Organism:
Acanthocheilonema viteae
NCBI taxonomy Id: 6277
Other names: A. viteae, Dipetalonema viteae
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