STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NAV_LOCUS3128Uncharacterized protein. (390 aa)    
Predicted Functional Partners:
NAV_LOCUS4096
Uncharacterized protein.
   
 0.972
NAV_LOCUS6451
Uncharacterized protein.
 
 
 0.917
NAV_LOCUS8541
Uncharacterized protein.
 
   
 0.914
NAV_LOCUS3129
Uncharacterized protein.
 
     
0.900
NAV_LOCUS733
Tyrosine-protein kinase.
   
 0.831
NAV_LOCUS5753
Uncharacterized protein.
 
  
 0.823
NAV_LOCUS5446
Uncharacterized protein.
    
 0.798
NAV_LOCUS3395
FCH domain-containing protein.
    
 0.790
NAV_LOCUS768
WH1 domain-containing protein.
    
 0.781
NAV_LOCUS767
VASP_tetra domain-containing protein.
    
 0.781
Your Current Organism:
Acanthocheilonema viteae
NCBI taxonomy Id: 6277
Other names: A. viteae, Dipetalonema viteae
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