STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NAV_LOCUS3138Polypeptide N-acetylgalactosaminyltransferase. (665 aa)    
Predicted Functional Partners:
NAV_LOCUS3207
Uncharacterized protein.
     
 0.849
NAV_LOCUS2338
Glyco_trans_2-like domain-containing protein; Belongs to the glycosyltransferase 2 family. GalNAc-T subfamily.
   
0.693
NAV_LOCUS8069
Uncharacterized protein.
     
 0.646
NAV_LOCUS7829
Uncharacterized protein.
     
 0.646
NAV_LOCUS1004
Uncharacterized protein.
   
 
  0.640
NAV_LOCUS2091
Polypeptide N-acetylgalactosaminyltransferase.
  
  
 
0.625
NAV_LOCUS9006
Uncharacterized protein.
     
 0.608
NAV_LOCUS3679
Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes.
     
 0.603
NAV_LOCUS1036
Lissencephaly-1 homolog; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for several dynein- and microtubule-dependent processes. Belongs to the WD repeat LIS1/nudF family.
     
  0.601
NAV_LOCUS3139
Uncharacterized protein.
     
 0.601
Your Current Organism:
Acanthocheilonema viteae
NCBI taxonomy Id: 6277
Other names: A. viteae, Dipetalonema viteae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.