STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NAV_LOCUS2906Uncharacterized protein. (356 aa)    
Predicted Functional Partners:
NAV_LOCUS1401
BSD domain-containing protein.
   
    0.645
NAV_LOCUS5015
Uncharacterized protein.
      
 0.643
NAV_LOCUS1722
WD_REPEATS_REGION domain-containing protein; Belongs to the MRE11/RAD32 family.
      
 0.577
NAV_LOCUS2096
Uncharacterized protein.
      
 0.535
NAV_LOCUS1268
CHCH domain-containing protein.
   
 
 0.441
NAV_LOCUS1625
Uncharacterized protein.
      
 0.430
NAV_LOCUS5573
V-SNARE domain-containing protein.
      
 0.422
NAV_LOCUS4543
Thioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family.
      
 0.418
NAV_LOCUS5716
Uncharacterized protein.
   
    0.412
NAV_LOCUS5715
Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
   
    0.412
Your Current Organism:
Acanthocheilonema viteae
NCBI taxonomy Id: 6277
Other names: A. viteae, Dipetalonema viteae
Server load: low (18%) [HD]