Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
NAV_LOCUS1901 | NAV_LOCUS3080 | A0A498S8H8 | A0A498S959 | Uncharacterized protein. | Rubis-subs-bind domain-containing protein. | 0.712 |
NAV_LOCUS1901 | NAV_LOCUS5584 | A0A498S8H8 | A0A498SGF1 | Uncharacterized protein. | Uncharacterized protein. | 0.935 |
NAV_LOCUS2092 | NAV_LOCUS3080 | A0A498SB21 | A0A498S959 | Uncharacterized protein. | Rubis-subs-bind domain-containing protein. | 0.706 |
NAV_LOCUS2092 | NAV_LOCUS4277 | A0A498SB21 | A0A498SEN1 | Uncharacterized protein. | Citrate synthase; Belongs to the citrate synthase family. | 0.989 |
NAV_LOCUS2092 | NAV_LOCUS6512 | A0A498SB21 | A0A498SSK2 | Uncharacterized protein. | ATP-citrate synthase; In the C-terminal section; belongs to the succinate/malate CoA ligase alpha subunit family. | 0.949 |
NAV_LOCUS2092 | NAV_LOCUS6992 | A0A498SB21 | A0A498SQL3 | Uncharacterized protein. | Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial; ATP-specific succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of ATP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. | 0.986 |
NAV_LOCUS2092 | NAV_LOCUS7019 | A0A498SB21 | A0A498SMB9 | Uncharacterized protein. | Succinate--CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and specificity for either ATP or GTP is provided by different beta subunits. | 0.989 |
NAV_LOCUS2092 | NAV_LOCUS7377 | A0A498SB21 | A0A498SGB2 | Uncharacterized protein. | Lipoyl-binding domain-containing protein. | 0.986 |
NAV_LOCUS2092 | NAV_LOCUS9034 | A0A498SB21 | A0A498SQW7 | Uncharacterized protein. | Lactoylglutathione lyase; Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione. | 0.659 |
NAV_LOCUS3080 | NAV_LOCUS1901 | A0A498S959 | A0A498S8H8 | Rubis-subs-bind domain-containing protein. | Uncharacterized protein. | 0.712 |
NAV_LOCUS3080 | NAV_LOCUS2092 | A0A498S959 | A0A498SB21 | Rubis-subs-bind domain-containing protein. | Uncharacterized protein. | 0.706 |
NAV_LOCUS3080 | NAV_LOCUS4277 | A0A498S959 | A0A498SEN1 | Rubis-subs-bind domain-containing protein. | Citrate synthase; Belongs to the citrate synthase family. | 0.699 |
NAV_LOCUS3080 | NAV_LOCUS5584 | A0A498S959 | A0A498SGF1 | Rubis-subs-bind domain-containing protein. | Uncharacterized protein. | 0.761 |
NAV_LOCUS3080 | NAV_LOCUS6512 | A0A498S959 | A0A498SSK2 | Rubis-subs-bind domain-containing protein. | ATP-citrate synthase; In the C-terminal section; belongs to the succinate/malate CoA ligase alpha subunit family. | 0.774 |
NAV_LOCUS3080 | NAV_LOCUS6992 | A0A498S959 | A0A498SQL3 | Rubis-subs-bind domain-containing protein. | Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial; ATP-specific succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of ATP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. | 0.774 |
NAV_LOCUS3080 | NAV_LOCUS7019 | A0A498S959 | A0A498SMB9 | Rubis-subs-bind domain-containing protein. | Succinate--CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and specificity for either ATP or GTP is provided by different beta subunits. | 0.727 |
NAV_LOCUS3080 | NAV_LOCUS7377 | A0A498S959 | A0A498SGB2 | Rubis-subs-bind domain-containing protein. | Lipoyl-binding domain-containing protein. | 0.707 |
NAV_LOCUS3080 | NAV_LOCUS9034 | A0A498S959 | A0A498SQW7 | Rubis-subs-bind domain-containing protein. | Lactoylglutathione lyase; Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione. | 0.791 |
NAV_LOCUS3080 | NAV_LOCUS9482 | A0A498S959 | A0A498SWT2 | Rubis-subs-bind domain-containing protein. | Uncharacterized protein. | 0.715 |
NAV_LOCUS4277 | NAV_LOCUS2092 | A0A498SEN1 | A0A498SB21 | Citrate synthase; Belongs to the citrate synthase family. | Uncharacterized protein. | 0.989 |
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