STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NAV_LOCUS1513BPL/LPL catalytic domain-containing protein. (1127 aa)    
Predicted Functional Partners:
NAV_LOCUS2372
Uncharacterized protein.
  
 0.969
NAV_LOCUS1860
Flavoprotein domain-containing protein.
  
 
 0.900
NAV_LOCUS4923
Uncharacterized protein.
  
 
 0.900
NAV_LOCUS6099
ADSL_C domain-containing protein.
  
 
 0.890
NAV_LOCUS1148
Uncharacterized protein.
    
 0.845
NAV_LOCUS2686
Uncharacterized protein.
    
 0.845
NAV_LOCUS4023
PolyA_pol domain-containing protein; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
  
  
 0.834
NAV_LOCUS8655
S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP.
  
  
 0.821
NAV_LOCUS4956
Nucleoside diphosphate kinase.
     
 0.786
NAV_LOCUS5150
PKS_KS domain-containing protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
     
 0.784
Your Current Organism:
Acanthocheilonema viteae
NCBI taxonomy Id: 6277
Other names: A. viteae, Dipetalonema viteae
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