STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NAV_LOCUS3224SEC7 domain-containing protein. (2057 aa)    
Predicted Functional Partners:
NAV_LOCUS2873
Uncharacterized protein.
    
 0.948
NAV_LOCUS1310
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
    
 0.921
NAV_LOCUS4531
Arf-GAP domain-containing protein.
    
 0.920
NAV_LOCUS5384
Coatomer subunit alpha; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network.
   
 0.918
NAV_LOCUS7127
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
    
 0.918
NAV_LOCUS2694
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
    
 0.897
NAV_LOCUS7527
Uncharacterized protein.
    
 0.897
NAV_LOCUS5974
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
    
 0.897
NAV_LOCUS9162
Uncharacterized protein.
    
 0.897
NAV_LOCUS3538
Uncharacterized protein.
    
 0.895
Your Current Organism:
Acanthocheilonema viteae
NCBI taxonomy Id: 6277
Other names: A. viteae, Dipetalonema viteae
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