STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NAV_LOCUS3336Protein kinase domain-containing protein. (1075 aa)    
Predicted Functional Partners:
NAV_LOCUS4759
Uncharacterized protein.
    
 
 0.971
NAV_LOCUS4783
Nop domain-containing protein.
    
 
 0.947
NAV_LOCUS5036
Tr-type G domain-containing protein.
    
 
 0.946
NAV_LOCUS3908
MPN domain-containing protein.
    
 
 0.943
NAV_LOCUS4676
WD_REPEATS_REGION domain-containing protein.
    
 
 0.926
NAV_LOCUS1610
TOG domain-containing protein.
   
 
 0.911
NAV_LOCUS1588
Pinin_SDK_memA domain-containing protein.
   
 0.906
NAV_LOCUS3829
Uncharacterized protein.
    
   0.905
NAV_LOCUS774
RRM domain-containing protein.
   
  0.903
NAV_LOCUS2943
Uncharacterized protein.
    
 
 0.901
Your Current Organism:
Acanthocheilonema viteae
NCBI taxonomy Id: 6277
Other names: A. viteae, Dipetalonema viteae
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.